Title : Pathogen-derived noncanonical epitopes: Are they valuable targets for novel vaccinations and shall we be concerned about autoimmune responses?
Abstract:
MHC class I complexes can present antigenic peptides that derive from canonical proteins as well as have a sequence produced by post-translational mechanisms such as proteasome-generated peptide splicing. Few pathogen-derived proteasome-generated spliced epitopes have been investigated for their immunogenicity so far. We developed several pipelines to identify and predict both canonical and noncanonical epitopes derived from pathogens, which are freely available. In addition, we tested the immunogenicity and the potential for therapeutical applications for those associated to various forms of infections. During my lecture I review the work done my team and others on the identification of pathogen-derived noncanonical epitopes, I discuss the risk of autoimmune response triggered by them and their potential relevance for future development on vaccines.